Installation
Main package
The package has many dependencies so by far the easiest way to install the package is to download Anaconda 2.7. Thereafter only two additional packages need to be installed. These are:
The latter from here cross plattform. For unix (mac+linux) users, the former is easily obtained by simply running
pip install tifffile
while for windows, it can be downloaded from here and installed by running:
pip install /path/to/tifffile‑2018.5.10‑cp27‑cp27m‑win_amd64.whl
assuming you are running a 64 bit version of windows.
Thereafter simply download the repository from here and install it by running
pip install .
in the first twoptb directory (i.e. the one containing setup.py).
Spike Extraction
The spike extraction algorithm currently used is c2s . For windows users hopes for installing this package are slim at best while for unix users the installation process seems to work fine.